IRMA MARTINEZ FLORES



DATOS GENERALES NOMBRAMIENTOS
Nombre completo   IRMA MARTINEZ FLORES
Máximo nivel de estudios   DOCTORADO
Antigüedad académica en la UNAM   15 años

Vigente   TECNICO ACADEMICO TITULAR B TC Definitivo
Centro de Ciencias Genómicas
Desde 16-08-2018
ESTIMULOS, PROGRAMAS, PREMIOS Y RECONOCIMIENTOS
* SNI I2010 - 2023
* PRIDE C2015 - 2022

INFORMACIÓN DE PUBLICACIONES
Firmas  
Martínez-Flores I. Martinez-Flores, I Martínez-Flores, I. Martinez-Flores, Irma
ID's SCOPUS  
55989802600 21834295200
Áreas de conocimiento  
Biochemistry & molecular biology Biochemistry and molecular biology Biotechnology & applied microbiology Biotechnology and applied microbiology Computer science, theory & methods
Genetics and heredity Jcs 2008 Mathematical & computational biology Microbiology Multidisciplinary sciences
Virology Agricultural and biological sciences (miscellaneous) Biotechnology Computer Science (miscellaneous) Computer Science Applications
Genetics Genetics (clinical) Medicine (miscellaneous) Microbiology Microbiology (medical)
Multidisciplinary Parasitology
Coautorías con entidades de la UNAM  
  • Consejo Técnico y Coordinación de la Investigación Científica
  • Centro de Ciencias Genómicas
  • Laboratorio Internacional de Investigación Sobre el Genoma Humano
  • Instituto de Biotecnología
  • Facultad de Ciencias
  • Facultad de Medicina
Revistas en las que ha publicado  (16):
  1. Bmc Bioinformatics, Reino Unido (2007)
  2. CURRENT GENOMICS, (2013)
  3. Current Protocols In Bioinformatics, Estados Unidos America (2018)
  4. FRONTIERS IN MICROBIOLOGY, Suiza (2019, 2020)
  5. Genome Announcements, (2017)
  6. JOURNAL OF BACTERIOLOGY, Estados Unidos America (1999, 2009, 2014)
  7. Lecture Notes in Artificial Intelligence, Suiza (2007)
  8. Medical Journal Of Indonesia, (1998)
  9. Methods in Molecular Biology, Estados Unidos America (2012)
  10. MICROBIOLOGICAL RESEARCH, Alemania (2024)
  11. MOLECULAR MICROBIOLOGY, Estados Unidos America (2004)
  12. Nature Biotechnology, Estados Unidos America (2010, 2012)
  13. NUCLEIC ACIDS RESEARCH, Reino Unido (2006, 2008, 2011, 2013, 2016)
  14. PEERJ, Reino Unido (2019)
  15. PLOS PATHOGENS, Estados Unidos America (2017)
  16. SCIENTIFIC REPORTS, Reino Unido (2016)


Documentos indexados (WoS y Scopus)

# Título del documento Autores Año Rista Fuente Citas WoS Citas Scopus
1Role of core lipopolysaccharide biosynthetic genes in the infection and adsorption of broad-host-range bacteriophages of Rhizobium etli.Coautor: Martínez-Flores I., Torres-Quintero M.C., Santamaría R.I., Bustos P., et al.2024MICROBIOLOGICAL RESEARCHWoS-id: 001244229100001
Scopus-id: 2-s2.0-85193741035
00
2Genomic Analysis Reveals the Genetic Determinants Associated With Antibiotic Resistance in the Zoonotic Pathogen Campylobacter spp. Distributed Globally2ᵒ autor: Martinez-Flores, Irma, Rivera-Mendoza, Daniel, Santamaria, Rosa I., Lozano, Luis, et al.2020FRONTIERS IN MICROBIOLOGYWoS-id: 000576163800001
Scopus-id: 2-s2.0-85091569866
1013
3Phylogenomic Rhizobium Species Are Structured by a Continuum of Diversity and Genomic ClustersCoautor: Martinez-Flores, Irma, Gonzalez, Victor, Isela Santamaria, Rosa, Bustos, Patricia, et al.2019FRONTIERS IN MICROBIOLOGYWoS-id: 000466460700001
Scopus-id: 2-s2.0-85068177418
1419
4Genomic diversity of prevalent Staphylococcus epidermidis multidrug-resistant strains isolated from a Children's Hospital in México City in an eight-years surveyCoautor: Martinez-Flores, Irma, Cabrera-Contreras, Roberto, Santamaria, I, Rosa, Bustos, Patricia, et al.2019PEERJWoS-id: 000498814300005
Scopus-id: 2-s2.0-85075623962
913
5Using RegulonDB, the Escherichia coli K-12 Gene Regulatory Transcriptional Network Database2ᵒ autor: Martínez-Flores I., Salgado H., Bustamante V.H., Alquicira-Hernández K., et al.2018Current Protocols In BioinformaticsScopus-id: 2-s2.0-85050792661
08
6The transcriptional regulator SsrB is involved in a molecular switch controlling virulence lifestyles of SalmonellaCoautor: Martínez-Flores I., Pérez-Morales D., Banda M.M., Elizabeth Chau, N. Y., et al.2017PLOS PATHOGENSWoS-id: 000406623700032
Scopus-id: 2-s2.0-85026880726
4043
7Complete genome sequences of three Rhizobium gallicum symbionts associated with common bean (Phaseolus vulgaris)Coautor: Martínez-Flores I., Bustos P., Santamaría R.I., Pérez-Carrascal O.M., et al.2017Genome AnnouncementsWoS-id: 000460686400010
Scopus-id: 2-s2.0-85016440839
57
8Complete genome sequences of eight Rhizobium symbionts associated with common bean (Phaseolus vulgaris)Coautor: Martínez-Flores I., Santamaría R.I., Bustos P., Pérez-Carrascal O.M., et al.2017Genome AnnouncementsWoS-id: 000460706000012
Scopus-id: 2-s2.0-85026491533
310
9RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyondCoautor: Martinez-Flores, Irma, Gama-Castro, Socorro, Salgado, Heladia, Santos-Zavaleta, Alberto, et al.2016NUCLEIC ACIDS RESEARCHWoS-id: 000371261700018
Scopus-id: 2-s2.0-84976874666
334351
10In silico clustering of Salmonella global gene expression data reveals novel genes co-regulated with the SPI-1 virulence genes through HilD1ᵉʳ autor: Martinez-Flores, Irma, Perez-Morales, Deyanira, Sanchez-Perez, Mishael, Paredes, Claudia C., et al.2016SCIENTIFIC REPORTSWoS-id: 000388557100003
Scopus-id: 2-s2.0-84998610822
1719
11In silico identification and experimental characterization of regulatory elements controlling the expression of the salmonella csrB and csrC genes2ᵒ autor: Martinez-Flores, I, Martinez, LC, Salgado, H, Fernandez-Mora, M, et al.2014JOURNAL OF BACTERIOLOGYWoS-id: 000332624300013
Scopus-id: 2-s2.0-84890942426
2727
12RegulonDB v8.0: Omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and moreCoautor: Martinez-Flores, I, Salgado, H, Peralta-Gil, M, Gama-Castro, S, et al.2013NUCLEIC ACIDS RESEARCHWoS-id: 000312893300028
Scopus-id: 2-s2.0-84876543942
325339
13Anti-sigma factors in E. coli: Common regulatory mechanisms controlling sigma factors availabilityCoautor y autor de correspondencia: Martínez-Flores I., Trevino-Quintanilla, LG, Freyre-González J.A.2013CURRENT GENOMICSWoS-id: 000325102200006
Scopus-id: 2-s2.0-84888090313
1718
14The BioPAX community standard for pathway data sharing (Nature Biotechnology (2010) 28, (935-942))Coautor: Martinez-Flores I., Demir E., Cary M.P., Paley S., et al.2012Nature BiotechnologyWoS-id: 000302785000028
Scopus-id: 2-s2.0-84859638634
01
15Extracting regulatory networks of escherichia coli from RegulonDB2ᵒ autor: Martínez-Flores I., Salgado H., López-Fuentes A., García-Sotelo J.S., et al.2012Methods in Molecular BiologyWoS-id: 000321878900011
Scopus-id: 2-s2.0-84855906633
1212
16RegulonDB version 7.0: Transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)Coautor: Martínez-Flores I., Gama-Castro S., Salgado H., Peralta-Gil M., et al.2011NUCLEIC ACIDS RESEARCHWoS-id: 000285831700018
Scopus-id: 2-s2.0-78651299341
274293
17The BioPAX community standard for pathway data sharingCoautor: Martinez-Flores I., Demir E., Cary M.P., Paley S., et al.2010Nature BiotechnologyWoS-id: 000281719100019
Scopus-id: 2-s2.0-77956664073
439533
18Erratum: The BioPAX community standard for pathway data sharing (Nat. Biotechnol. (2010) 28 (935-942)Coautor: Martinez-Flores I., Demir E., Paley S., Fukuda K., et al.2010Nature BiotechnologyWoS-id: 000285088400029
Scopus-id: 2-s2.0-78650004198
53
19Bioinformatics Resources for the Study of Gene Regulation in BacteriaCoautor: Martinez-Flores, I, Collado-Vides, J, Salgado, H, Morett, E, et al.2009JOURNAL OF BACTERIOLOGYWoS-id: 000261628100002
Scopus-id: 2-s2.0-58149495994
2021
20RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigationCoautor: Martinez-Flores, I, Gama-Castro, S, Jimenez-Jacinto, V, Peralta-Gil, M, et al.2008NUCLEIC ACIDS RESEARCHWoS-id: 000252545400022
Scopus-id: 2-s2.0-38549140094
371399
21Automatic reconstruction of a bacterial regulatory network using Natural Language ProcessingCoautor: Martínez-Flores I., Rodríguez-Penagos C., Salgado H., Collado-Vides J.2007Bmc BioinformaticsWoS-id: 000249274300002
Scopus-id: 2-s2.0-34548499877
3339
22NLP-based curation of bacterial regulatory networksCoautor: Martínez-Flores I., Rodríguez-Penagos C., Salgado H., Collado-Vides J.2007Lecture Notes in Artificial IntelligenceScopus-id: 2-s2.0-37149056907
01
23RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions.Coautor: Martínez-Flores I., Salgado H., Gama-Castro S., Peralta-Gil M., et al.2006NUCLEIC ACIDS RESEARCHWoS-id: 000239307700086
Scopus-id: 2-s2.0-33644873438
265297
24Analysis of the Frz signal transduction system of Myxococcus xanthus shows the importance of the conserved C-terminal region of the cytoplasmic chemoreceptor FrzCD in sensing signals2ᵒ autor: Martínez-Flores I., Bustamante V.H., Vlamakis H.C., Zusman D.R.2004MOLECULAR MICROBIOLOGYWoS-id: 000223495100017
Scopus-id: 2-s2.0-4444351651
8984
25The ompB operon partially determines differential expression of OmpC in Salmonella typhi and Escherichia coli1ᵉʳ autor: Martínez-Flores I., Cano R., Bustamante V.H., Calva E., et al.1999JOURNAL OF BACTERIOLOGYWoS-id: 000078040200026
Scopus-id: 2-s2.0-0345434969
3637
26Novel porin genes and modes of porin regulation in salmonella typhi1ᵉʳ autor: Martínez-Flores, I., Oropeza, R., Cano, R., Sampieri, C.L., et al.1998Medical Journal Of IndonesiaScopus-id: 2-s2.0-85008690455
00

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